CDS

Accession Number TCMCG057C07599
gbkey CDS
Protein Id XP_018470998.1
Location join(30019608..30019833,30019917..30020046,30020135..30020246,30020330..30020494,30020577..30020663,30020740..30020856,30020941..30021048,30021130..30021336,30021425..30021499)
Gene LOC108842548
GeneID 108842548
Organism Raphanus sativus

Protein

Length 408aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615496.1
Definition PREDICTED: 3-isopropylmalate dehydrogenase 3, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
KEGG_TC -
KEGG_Module M00432        [VIEW IN KEGG]
M00535        [VIEW IN KEGG]
KEGG_Reaction R00994        [VIEW IN KEGG]
R04426        [VIEW IN KEGG]
R08621        [VIEW IN KEGG]
R08625        [VIEW IN KEGG]
R08629        [VIEW IN KEGG]
R08636        [VIEW IN KEGG]
R08642        [VIEW IN KEGG]
R08646        [VIEW IN KEGG]
R10052        [VIEW IN KEGG]
KEGG_rclass RC00084        [VIEW IN KEGG]
RC00114        [VIEW IN KEGG]
RC00417        [VIEW IN KEGG]
RC03036        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00052        [VIEW IN KEGG]
ko:K21360        [VIEW IN KEGG]
EC 1.1.1.85        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00290        [VIEW IN KEGG]
ko00660        [VIEW IN KEGG]
ko00966        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00660        [VIEW IN KEGG]
map00966        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016143        [VIEW IN EMBL-EBI]
GO:0016144        [VIEW IN EMBL-EBI]
GO:0019748        [VIEW IN EMBL-EBI]
GO:0019757        [VIEW IN EMBL-EBI]
GO:0019758        [VIEW IN EMBL-EBI]
GO:0019760        [VIEW IN EMBL-EBI]
GO:0019761        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044550        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]
GO:1901659        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCAGCTTTACAAACGAACACACGGTTGCATCCGATCAACGTCTTCCCAGGAAAATGCAGATCTCTCAACGATCACTCTCGCGCGCCGTGTAGAGTAAGGTGCGCCGCAGTTTCACCGGGGAAAAAACGGTTTAACATCGCTCTCCTTCCCGGCGACGGGATCGGTCCGGAAGTCATCTCCGTCGCCAAGAACGTGCTTCAGCAAGCTGGATCTCTCGAAGGACTGGAGTTTAACTTCCAGGAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTCGGAGTGCCCTTGCCGGAGGAATCCTTTGAAGCTGCAAAACAATCTGACGCCATACTTCTTGGAGCTATCGGAGGGTACAAATGGGACAACAATGAGAAACACCTGAGACCAGAGATGGCTCTGTTTTACCTTAGAAGAGATCTCAAAGTCTTTGCAAACCTCAGACCTGCTTCCGTTTTGCCTCAGCTAGTCGATGCTTCCACATTGAAGAGAGAAGTGGCAGAAGGTGTTGATATGATGATTGTAAGGGAGCTTACAGGAGGTATCTACTTTGGAGAGCCAAGAGGAATCAAGACCAACGAAAACGGCGAAGAAGTCGGGTTTAATACAGAGTTCTACGCTGCTCATGAGATCGATAGAATTGCTCGTGTTGCGTTCGAGACTGCTAGGAAACGACGTGGCAAGCTGTGTTCTGTCGACAAAGCCAATGTGTTGGACGCATCAATATTGTGGAGGAAAAGAGTAACAGCGTTAGCCTCTGAGTATCCAGATGTTGAACTAACACATATGTATGTCGACAATGCTGCAATGCAGCTTATTCGTGACCCCAAACAGTTTGACACAATAGTCACCAATAACATTTTTGGTGATATATTATCTGATGAGGCTTCAATGATCACTGGAAGCATTGGGATGCTTCCATCTGCTAGTCTCGGTGTATCGGGACCTGGACTGTTTGAGCCTATACATGGTTCAGCACCAGACATTGCTGGTCAGGACAAGGCAAACCCATTGGCGACCATTCTCAGCGCTGCAATGCTTTTGAAATATGGACTTGGAGAAGAAAAGGCTGCAAAGAGGATTGAAGACGCGGTCTTGGCTGCTCTGAACAAAGGTTTTAGAACCGGTGACATCTACTCTCCTGGAAATAAACTGGTGGGATGCAAGGAGATGGGTGAGGAGGTGCTAAAATCAGTGGACGCCAAAGTTGCAGCTACTGTTTAA
Protein:  
MAAALQTNTRLHPINVFPGKCRSLNDHSRAPCRVRCAAVSPGKKRFNIALLPGDGIGPEVISVAKNVLQQAGSLEGLEFNFQEMPVGGAALDLVGVPLPEESFEAAKQSDAILLGAIGGYKWDNNEKHLRPEMALFYLRRDLKVFANLRPASVLPQLVDASTLKREVAEGVDMMIVRELTGGIYFGEPRGIKTNENGEEVGFNTEFYAAHEIDRIARVAFETARKRRGKLCSVDKANVLDASILWRKRVTALASEYPDVELTHMYVDNAAMQLIRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGVSGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEKAAKRIEDAVLAALNKGFRTGDIYSPGNKLVGCKEMGEEVLKSVDAKVAATV